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All the selections, round by round, from the 2006 National Draft
| Year | Pick | Player | Club |
| 2006 | 1 | Bryce Gibbs | Carlton |
| 2006 | 2 | Scott Gumbleton | Essendon |
| 2006 | 3 | Lachlan Hansen | Kangaroos |
| 2006 | 4 | Matthew Leuenberger | Brisbane |
| 2006 | 5 | Travis Boak | Port Adelaide |
| 2006 | 6 | Mitchell Thorp | Hawthorn |
| 2006 | 7 | Joel Selwood | Geelong |
| 2006 | 8 | Ben Reid | Collingwood |
| 2006 | 9 | David Armitage | St Kilda |
| 2006 | 10 | Nathan Brown | Collingwood |
| 2006 | 11 | Andrejs Everitt | Western Bulldogs |
| 2006 | 12 | James Frawley | Melbourne |
| 2006 | 13 | Jack Riewoldt | Richmond |
| 2006 | 14 | James Sellar | Adelaide |
| 2006 | 15 | Daniel O'Keefe | Sydney |
| 2006 | 16 | Mitchell Brown | West Coast |
| 2006 | 17 | Shaun Hampson | Carlton |
| 2006 | 18 | Leroy Jetta | Essendon |
| 2006 | 19 | Shaun Grigg | Carlton |
| 2006 | 20 | Tom Hislop | Essendon |
| 2006 | 21 | Gavin Urquhart | Kangaroos |
| 2006 | 22 | Albert Proud | Brisbane |
| 2006 | 23 | Paul Stewart | Port Adelaide |
| 2006 | 24 | Brent Renouf | Hawthorn |
| 2006 | 25 | Nathan Djerrkura | Geelong |
| 2006 | 26 | Shane Edwards | Richmond |
| 2006 | 27 | Brad Howard | St Kilda |
| 2006 | 28 | Chris Dawes | Collingwood |
| 2006 | 29 | Eric MacKenzie | West Coast |
| 2006 | 30 | Ricky Petterd | Melbourne |
| 2006 | 31 | Clayton Collard | Fremantle |
| 2006 | 32 | Kurt Tippett | Adelaide |
| 2006 | 33 | Jarryd Morton | Hawthorn |
| 2006 | 34 | Chris Schmidt | Brisbane |
| 2006 | 35 | Mark Austin | Carlton |
| 2006 | 36 | Alwyn Davey | Essendon |
| 2006 | 37 | Todd Goldstein | Kangaroos |
| 2006 | 38 | James Hawksley | Brisbane |
| 2006 | 39 | Nathan Krakouer | Port Adelaide |
| 2006 | 40 | Josh P. Kennedy | Hawthorn |
| 2006 | 41 | Tom Hawkins (F/S) | Geelong |
| 2006 | 42 | Bachar Houli | Essendon |
| 2006 | 43 | Tim Houlihan | West Coast |
| 2006 | 44 | Brad Dick | Collingwood |
| 2006 | 45 | Brennan Stack | Western Bulldogs |
| 2006 | 46 | Colin Garland | Melbourne |
| 2006 | 47 | Kyle Reimers | Essendon |
| 2006 | 48 | David Mackay | Adelaide |
| 2006 | 49 | Daniel Currie | Sydney |
| 2006 | 50 | Will Schofield | West Coast |
| 2006 | 51 | Clint Benjamin | Carlton |
| 2006 | 52 | Brock O'Brien | Fremantle |
| 2006 | 53 | Lindsay Thomas | Kangaroos |
| 2006 | 54 | Matt Tyler | Brisbane |
| 2006 | 55 | Robert Gray | Port Adelaide |
| 2006 | 56 | Garry Moss | Hawthorn |
| 2006 | 57 | Simon Hogan | Geelong |
| 2006 | 58 | Daniel Connors | Richmond |
| 2006 | 59 | Jarryd Allen | St Kilda |
| 2006 | 60 | Carl Peterson | Richmond |
| 2006 | 61 | Josh Hill | Western Bulldogs |
| 2006 | 62 | Isack Weetra | Melbourne |
| 2006 | 63 | Tyson Goldsack | Collingwood |
| 2006 | 64 | Nick Gill | Adelaide |
| 2006 | 65 | Peter Faulks | Sydney |
| 2006 | 66 | Malcom Lynch | Western Bulldogs |
| 2006 | 67 | Joe Anderson | Carlton |
| 2006 | 69 | Ben Warren | Kangaroos |
| 2006 | 70 | Sam Sheldon | Brisbane |
| 2006 | 71 | Justin Westhoff | Port Adelaide |
| 2006 | 73 | Andrew Collins | Richmond |
| 2006 | 74 | Matthew Ferguson | St Kilda |
| 2006 | 76 | Paul O'Shea | Western Bulldogs |
| 2006 | 77 | Calib Mourish | Fremantle |
| 2006 | 78 | Bryce Campbell | Adelaide |
| 2006 | 79 | Jesse White | Sydney |
| 2006 | 80 | James Thomson | West Coast |
| 2006 | 82 | Aaron Edwards | Kangaroos |
| 2006 | 83 | Ryan Williams | Port Adelaide |
| 2006 | 86 | David Rodan | Port Adelaide |
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